Sunday, October 25, 2020

The patient who died of Covid-19 may have received a placebo.

It is sad for the doctor who died but his sacrifice opens the door for a safe vaccine. 


Covid: No safety concerns found with Oxford vaccine trial after Brazil death

Published
4 days ago
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An employee is seen at the Federal University of Sao Paulo (Unifesp) where the trials of the Oxford/AstraZeneca coronavirus vaccine are being conductedIMAGE COPYRIGHTREUTERS
image captionBrazil has been conducting trials of the vaccine

Trials of a Covid-19 vaccine being developed by AstraZeneca and Oxford University will continue, following a review into the death of a volunteer in Brazil.

Brazil's health authority has given no details about the death, citing confidentiality protocols.

Oxford University said a "careful assessment" had revealed no safety concerns.

The BBC understands that the volunteer did not receive the vaccine.

Only around half the volunteers in the trial are given the actual Oxford University Covid-19 vaccine. The second group are being given an existing licensed vaccine for meningitis. 

Neither the participants nor their families know which vaccine they are being given. 

This enables the researchers to compare the results for the two groups in order to measure whether the vaccine is effective.

AstraZeneca said in a statement that it could not comment on individual cases but it "can confirm that all required review processes have been followed". 

"All significant medical events are carefully assessed by trial investigators, an independent safety monitoring committee and the regulatory authorities," it said. "These assessments have not led to any concerns about continuation of the ongoing study."

There are high hopes that the Oxford/AstraZeneca vaccine could be one of the first to make it onto the market.

It had successful phase 1 and 2 testing, while phase 3 testing is being carried out on participants in countries including the UK, Brazil and India.

Trials of the Oxford vaccine were paused last month after a reported side effect in a patient in the UK, but were resumed days later when it was deemed safe to continue.

Phase 3 trials in the US remain on hold while the regulator there conducts its own assessment. A senior official was quoted by Bloomberg on Wednesday as saying he expected US trials to restart later in the week.

Trial 'should continue'

Brazil's health authority Anvisa said it was informed of the Brazilian volunteer's death on 19 October. 

Brazilian media report that the volunteer was a 28-year-old doctor who died of Covid-19 complications. They say the doctor had worked with infected patients. 

This has not been publicly confirmed by Anvisa.

In a statement, Oxford University said: "All significant medical incidents, whether participants are in the control group or the Covid-19 vaccine group, are independently reviewed.

"The independent review, in addition to the Brazilian regulator, have both recommended that the trial should continue," it said.

Brazil has plans to purchase the vaccine if it is approved.

The country has had nearly 5.3 million confirmed coronavirus cases - the third highest tally in the world after the US and India - and is second only to the US in terms of deaths, with nearly 155,000 registered so far, according to data collated by Johns Hopkins University.

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RNA vaccines: An introduction

RNA based vaccines, which are relatively quick and inexpensive to make

 and may be safer to use could herald more rapid control over

 the spread of infectious diseases, including COVID-19. 

This policy briefing summarizes the essentials.

Summary

  • Unlike a normal vaccine, RNA vaccines work by introducing an mRNA sequence (the molecule which tells cells what to build) which is coded for a disease specific antigen, once produced within the body, the antigen is recognised by the immune system, preparing it to fight the real thing
  • RNA vaccines are faster and cheaper to produce than traditional vaccines, and a RNA based vaccine is also safer for the patient, as they are not produced using infectious elements
  • Production of RNA vaccines is laboratory based, and the process could be standardised and scaled, allowing quick responses to large outbreaks and epidemics
  • Most current research is into RNA vaccines for infectious diseases and cancer, for which there are several early-stage clinical trials, there is also some early research into the potential of RNA vaccines for allergies
  • There is still a lot of work to be done before mRNA vaccines can become standard treatments, in the meantime, we need a better understanding of their potential side effects, and more evidence of their long term efficacy

What are RNA vaccines and how do they work?

Conventional vaccines usually contain inactivated disease-causing organisms or proteins made by the pathogen (antigens), which work by mimicking the infectious agent. They stimulate the body’s immune response, so it is primed to respond more rapidly and effectively if exposed to the infectious agent in the future.

RNA vaccines use a different approach that takes advantage of the process that cells use to make proteins: cells use DNA as the template to make messenger RNA (mRNA) molecules, which are then translated to build proteins. An RNA vaccine consists of an mRNA strand that codes for a disease-specific antigen. Once the mRNA strand in the vaccine is inside the body’s cells, the cells use the genetic information to produce the antigen. This antigen is then displayed on the cell surface, where it is recognised by the immune system.

How are RNA vaccines produced and administered?

A major advantage of RNA vaccines is that RNA can be produced in the laboratory from a DNA template using readily available materials, less expensively and faster than conventional vaccine production, which can require the use of chicken eggs or other mammalian cells.

RNA vaccines can be delivered using a number of methods: via needle-syringe injections or needle-free into the skin; via injection into the blood, muscle, lymph node or directly into organs; or via a nasal spray. The optimal route for vaccine delivery is not yet known. The exact manufacturing and delivery process of RNA vaccines can vary depending on the type.

Types of RNA vaccine

  1. Non-replicating mRNA

    The simplest type of RNA vaccine, an mRNA strand is packaged and delivered to the body, where it is taken up by the body’s cells to make the antigen.

  2. In vivo self-replicating mRNA

    The pathogen-mRNA strand is packaged with additional RNA strands that ensure it will be copied once the vaccine is inside a cell. This means that greater quantities of the antigen are made from a smaller amount of vaccine, helping to ensure a more robust immune response.

  3. In vitro dendritic cell non-replicating mRNA vaccine

    Dendritic cells are immune cells that can present antigens on their cell surface to other types of immune cells to help stimulate an immune response. These cells are extracted from the patient’s blood, transfected with the RNA vaccine, then given back to the patient to stimulate an immune reaction.

Benefits

Benefits of mRNA vaccines over conventional approaches are1:

  • Safety: RNA vaccines are not made with pathogen particles or inactivated pathogen, so are non-infectious. RNA does not integrate itself into the host genome and the RNA strand in the vaccine is degraded once the protein is made.
  • Efficacy: early clinical trial results indicate that these vaccines generate a reliable immune response and are well-tolerated by healthy individuals, with few side effects.
  • Production: vaccines can be produced more rapidly in the laboratory in a process that can be standardised, which improves responsiveness to emerging outbreaks.

Important challenges

The methods to make mRNA vaccines can be very effective. However, there are technical challenges to overcome to ensure these vaccines work appropriately:

  • Unintended effects: the mRNA strand in the vaccine may elicit an unintended immune reaction. To minimise this the mRNA vaccine sequences are designed to mimic those produced by mammalian cells.
  • Delivery: delivering the vaccine effectively to cells is challenging since free RNA in the body is quickly broken down. To help achieve delivery, the RNA strand is incorporated into a larger molecule to help stabilise it and/or packaged into particles or liposomes.
  • Storage: many RNA vaccines, like conventional vaccines, need to be frozen or refrigerated. Work is ongoing to reliably produce vaccines that can be stored outside the cold chain, since these will be much more suitable for use in countries with limited or no refrigeration facilities.

How could RNA vaccines be used for human health?

The most active areas of research into RNA vaccines are infectious diseases and cancer where there is research ongoing as well as early-stage clinical trials. Work into the use of RNA vaccines to treat allergy is still at the early research stage2.

Infectious diseases

Researchers using conventional approaches have struggled to develop effective vaccines against a number of pathogens, particularly viruses, that cause both acute (Influenza, Ebola, Zika) and chronic (HIV-1, herpes simplex virus) infection. RNA vaccines are being explored as a way to more rapidly and cheaply produce vaccines for these diseases, particularly in response to emerging outbreaks. Clinical trials have been carried out or are ongoing on mRNA vaccines for influenza, cytomegalovirus, HIV-1, rabies and Zika virus.

Case study: A recent study3 explored the use of programmable self-replicating RNA vaccines, delivered in a nanoparticle, for a range of infectious diseases including Ebola virus, H1N1 Influenza and Toxoplasma gondii, which were effective in mice. These vaccines can be manufactured in approximately one week and made against a range of diseases, demonstrating potential terms of swift response to disease outbreaks.

Cancer vaccines

Cancer vaccines are a form of immunotherapy, where the vaccine triggers the immune system into targeting the cancer. Both dendritic cell vaccines and personalised cancer vaccines, where the RNA sequence in the vaccine is designed to code for cancer-specific antigens, are being explored. Over 50 clinical trials are listed on clinicaltrials.gov for RNA vaccines in a number of cancers, including blood cancers, melanoma, glioblastoma (brain cancer) and prostate cancer.

Case study: Researchers sequenced the genomes of tumours from patients with melanoma. They made RNAs coding for mutant proteins, specific to the patients’ cancers, that could generate an immune response and made these into patient-specific vaccines. Eight out of thirteen people vaccinated stayed tumour free up to two years later4

RNA vaccines – who’s involved?

There are a number of companies and initiatives with an interest in RNA vaccines including the Merit Consortium, which is a European initiative to develop cancer vaccines, while UniVax is a research collaboration to develop a universal influenza vaccine. Companies such as Moderna Therapeutics, CureVac and BioNTech, are involved in phase I trials of RNA vaccines in cancer and infectious disease. These companies are also exploring the broader use of RNA therapeutics for diseases where important proteins are missing or defective and mRNA treatments could be used to express a functional copy of the protein. 

Harnessing RNA vaccines for health – what are the challenges and key considerations?

  • Research and clinical trials: further research is needed to address technical hurdles such as vaccine stability and delivery. It is not yet certain which production method(s) are currently the best. Clinical trial data is limited – more long-term studies are needed to determine the effectiveness of RNA vaccines.
  • Production: vaccine production is currently small scale and it is not clear if current methods are capable of epidemic-level vaccine production.
  • Resources: the personalised approach for cancer vaccines is time and resource intensive and work is needed to determine if this approach is cost-effective.
  • Safety: better understanding of vaccine adverse effects is needed – these can include inflammation or autoimmune reactions.

 

  1. Pardi N, Hogan MJ, Porter FW, et al. mRNA vaccines - a new era in vaccinology. Nat Rev Drug Discov. 2018; 17(4): 261-279.
  2. Weiss R, Scheiblhofer S, Thalhamer, J. Generation and Evaluation of Prophylactic mRNA Vaccines Against Allergy. Methods Mol Biol. 2017; 1499: 123-139.
  3. Chahal JS, Kahn OF, Cooper CL, et al. Dendrimer-RNA nanoparticles generate protective immunity against lethal Ebola, H1N1 influenza, and Toxoplasma gondii challenges with a single dose. Proc Natl Acad Sci USA. 2016; 113(29): E4133-42.
  4. Sahin U, Derhovanessian E, Miller M, et al. Personalized RNA mutanome vaccines mobilize poly-specific therapeutic immunity against cancer. Nature. 2017; 547(7662): 222-226.

 

Tuesday, October 20, 2020

IF I HAVE TO EAT MEAT, LET IT BE FROM ALBERTA CATTLE.

 Gentle People:

 If in November Joe Biden is elected President of the United States, he promises to cancel the Tar Sands deal with Canada and that is a wonderful promise! It will be a great day for everybody fighting to clean and Green this planet. We can finally put money to work protecting the environment as opposed to helplessly watching as our polluting industrial economy destroys the environment. It will become our priority to change the world economy and make it work for the protection of Nature, and that is absolutely necessary for our basic survival! If Covid-19 teaches us anything it is that we are late...very late beginning this work and Donald Trump, his Republican Party and his personal friends around the world have absolutely zero interest to change the status quo.
 In Canada, I suggest Alberta go back to Cattle ranching as opposed to depending on the oil and gas industry. Why? Because Canada is paying Brazil millions of Dollars for Cattle meat when we in Canada have the best Ranch lands on Earth? And Brazil farmers are destroying the Amazon rain forest to clear the land for Cattle ranching. Brazil's President, Jair Bolsonaro, has permitted Brazilian loggers and farmers to clear the Amazon forest for hard-wood lumber and for Cattle ranching. 
 The Amazon Rain Forests are the lungs of the Earth and all must absolutely be protected and enhanced. The fact that U.S. president Donald Trump has lifted the ban on Brazil's Beef imports opens the door for exploitation of the  Rain Forest. Canada does not need Brazilian meat and the world should pay Brazilian farmers to plant and care for hard-wood trees as opposed to clear cutting and burning the Amazon. 
Thanks for reading.  J.N.R.

Sunday, October 18, 2020

THE FIFTY REASONS AMERICANS SHOULD NOT VOTE FOR REPUBLICANS.


Gentle Readers:

 The following list is slightly unfair to Donald Trump. What it represents are his attempts to solve U.S. social problems from the perspective of a conservative unsuccessful business man. A difficult task if you live so far above the poverty line it becomes invisible!  Before his election, Donald Trump was an international hotel magnate who borrowed far above his ability to repay his debts. He borrowed millions and failed to pay back his debts to the largest German Bank in the world, and so he conveniently went bankrupt. The Deauchbank in Germany is the same bank president PUTIN OF RUSSIA keeps his money and I wonder how Putin felt when Trump went bankrupt. Trump once declared openly that " Putin is my friend."

 With a little help from his friends, Donald Trump became president of the United States and after being sworn in he absolutely refused to disclose his earnings to the U.S. TAX DEPARTMENT.  

And now here is the Simpson's list of fifty ethical and social mistakes the new president made during his first term in office. To be fair, D. Trump tried to correct some of those mistakes.

Here is that list:

Made it okay to shoot hibernating bears...
Put children in cages...
Called Mexicans rapists...
Imitated disabled reporter...
Looks lousy in a tennis outfit...
Can’t get wife to hold hand...
Called third world countries ****holes...
Called Tim Cook ‘Tim Apple’...
Said Jewish people who vote Democrat are disloyal...
Showed top secret documents at Mar-A-Lago restaurant...
Called white supremacists ‘fine people’...
Leaked classified information to Russian ambassador...
Asked the president of Ukraine to investigate the Bidens...
Called for China to investigate the Bidens...
Walked into the dressing room at Miss Teen USA pageant...
Pressed the Australian prime minister to help Barr investigate Mueller...
Talked about grabbing *****
Lied about the size of his inauguration...
Refused to release tax returns...
Gutted the E.P.A....
Confiscated and destroyed interpreter’s notes after meeting with Putin...
Tweeted classified photo of Iran missile site...
Called Baltimore a ‘disgusting, rat and rodent-infested mess’...
Described Meryl Streep as ‘over-rated’...
Leaked information to the press about the 2017 Manchester arena bombing...
Did not attend any White House correspondents’ dinner...
Said Megyn Kelly had ‘blood coming out of her whatever’...
Called Carly Fiorina ‘horseface’...
Ruined impeachment...
Brought Ivanka to the G7 summit...
Corrupted Congress...
Appointed and didn’t fire Betsy DeVos...
Put Jared in charge of Mideast...
Served McDonald’s to Clemson football team...
Destroyed democracy...
Lost Hong Kong...
Threatened Marie Yovanovitch...
Pulled the U.S. out of climate agreement...
Allowed bounties on soldiers...
Invaded Portland...
Withdrew from W.H.O.   ...
Bragged about knowing the date...
Commuted sentences...
Said to swallow bleach...
Person, woman, man, camera, TV...
Destroyed post office...
Paid $750 in taxes...
Wants third term...
Wanted to be on Mount Rushmore...
And we haven’t even said the worst one...

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 Gentle People:

 If this November Joe Biden is elected President of the United States, he promises to cancel the Tar Sands deal with Canada and that is a wonderful promise! It will be a great day for everybody fighting to clean and Green this planet. Putting money to work for the environment, as opposed to destroying the environment, is our priority and removing a polluting economy is absolutely necessary for our basic survival! If Covid-19 teaches us anything it is that we are late...very late beginning this work and Donald Trump and his Republican Party have absolutely zero interest to change the status quo.

 In Canada, I suggest Alberta go back to Cattle ranching as opposed to depending on the oil and gas industry. Why? Because Canada is paying Brazil millions of Dollars for Cattle meat when we in Canada have the best Ranch lands on Earth? And Brazil farmers are destroying the Amazon rain forest to clear the land for Cattle ranching. The Amazon forest is called the lungs of the Earth and absolutely must be protected. The world should pay Brazilian farmers to plant and care for hard-wood trees as opposed to clear cutting the Amazon forest.

Thanks for reading.  J.N.R.

Tuesday, October 6, 2020

A SOLUTION TO STOP RACISM AND NATIONALISM.

 

  In Quebec, the death of an English speaking Native American lady exposed systemic racism in our medical care system. She was dying and cried for help but the French speaking nurse chastised and ignored her. The nurse made an irresponsible value judgement and it cost the life of a patient. Sadly, it is well understood that racism and nationalism have destroyed millions of lives over centuries.

 The question is how do we stop the hate? In Canada the solution is not easy and it will take time but it will work with the economic help of the Provincial and Federal governments. 

1. With full permission and help from native leaders, build science based schools on every Native reserve in Canada and teach: Botany, Biology and Physics. Place native leaders in charge of their own schools. 

2. Build small hospitals and clinics on every Native reserve in Canada and fill them with students from the native schools. Create temporary contracts with doctors and nurses from inside and outside Canada willing to work under Native administration and who are willing to teach what they know to Native students.

3. Change Canadian history books so that one culture or group is not vilified by other cultures or groups. Always keep school text books fact based and direct as well as honest and unemotional. Objective fairness is a universal value we can all strive to apply to our subjective lives in order to create peace and harmony in Canada and around the world. Education is the key for everybody! Thanks for reading!

J.N.R.


Friday, October 2, 2020

What I am learning so far.

 From Wikipedia

 1. Viral DNA create lytic cycles causing host cells to lyse and release more viruses into the host.
2.   The lysogenic cycle is when the viral DNA is incorporated into the host genome, allowing it to go unnoticed by the immune system. Eventually, it gets reactivated and enters the lytic cycle. 

Transmission methods[edit]

Within the host, pathogens can do a variety of things to cause disease and trigger the immune response. Microbes and fungi cause symptoms due to their high rate of reproduction and tissue invasion. This causes an immune response, resulting in common symptoms as phagocytes break down the bacteria within the host. Some bacteria, such as H. pylori, can secrete toxins into the surrounding tissues, resulting in cell death or inhibition of normal tissue function. 

  Viruses, however, use a completely different mechanism to cause disease. Upon entry into the host, viral pathogens enter the lytic cycle; this is when the virus inserts its DNA or RNA into the host cell, replicates, and eventually causes the cell to lyse, releasing more viruses into the environment.

  The lysogenic cycle, however, is when the viral DNA is incorporated into the host genome, allowing it to go unnoticed by the immune system. Eventually, it gets reactivated and enters the lytic cycle, giving it an indefinite “shelf life” so to speak.[6]

Tuesday, September 29, 2020

What I have learned so far.

FROM WIKIPEDIA.COM

Interferons (IFNs, /ˌɪntərˈfɪərɒn/[1]) are a group of signaling proteins[2] made and released by host cells in response to the presence of several  viruses. In a typical scenario, a virus-infected cell will release interferons causing nearby cells to heighten their anti-viral defenses.

IFNs belong to the large class of proteins known as cytokines, molecules used for communication between cells to trigger the protective defenses of the immune system that help eradicate pathogens.[3] Interferons are named for their ability to "interfere" with viral replication[3] by protecting cells from virus infections. IFNs also have various other functions: they activate immune cells, such as natural killer cells and macrophages; they increase host defenses by up-regulating antigen presentation by virtue of increasing the expression of major histocompatibility complex (MHC) antigens. Certain symptoms of infections, such as fevermuscle pain and "flu-like symptoms", are also caused by the production of IFNs and other cytokines.

More than twenty distinct IFN genes and proteins have been identified in animals, including humans. They are typically divided among three classes: Type I IFN, Type II IFN, and Type III IFN. IFNs belonging to all three classes are important for fighting viral infections and for the regulation of the immune system.

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WHAT I HAVE LEARNED SO FAR.

 An invading virus, like SARS-CoV-2, will quietly enter a host cell and connect with that cell's reproduction RNA. It then reproduces itself and enters the next cell. In the process of infecting a human, the virus will block host cells from creating interferon which signals the body's immune system.    

  When and If a host cell discovers it is being infected by a virus or bacteria, it creates a signalling protein known as interferon which in turn activates the immune system. Within the immune system is a cellular enzyme known as RNAseL, which finds and destroys the viral RNA inside the infected cell and stops that cell from reproducing. In effect it is like a shut off electric switch. The virus cannot replicate but neither does the human host cell. A good question is can we artificially create viral resistant stronger human cells faster than the virus can clone itself within human host cells?

 If the SARS-CoV-2 is allowed to silently enter millions of human host cells because interferon is not signalling fast enough, and the immune system is not reacting fast enough, the consequences can be deadly. If the lung cells are infected and the immune system finally reacts to destroy the virus inside the cells, the ability of the lung cells to replicate is impaired and oxygenation, stops. When breathing is impaired the consequence is often death.  

Gentle People:

 I am not a research scientist or a doctor and I interpret what I have learned, or believe I have learned, from experts in their fields. If I later discover I was misinformed or on the wrong path, I will remove or change the information. You can follow many of those experts on my non-profit blog: human4us2.blogspot.com

Question?

  Can scientists create a better and more responsive interferon or an artificial RNA that attaches itself to a corona virus and blocks the virus from entering and replicating itself inside a human cell?

1AU1 Human Interferon-Beta01.png
The molecular structure of human interferon-beta (PDB1AU1​).
Identifiers
SymbolInterferons
PfamPF00143
InterProIPR000471
SMARTSM00076
PROSITEPDOC00225
CATH1au1
SCOPe1au1 / SUPFAM
CDDcd00095

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